CW 23 — Jun 04

Prep

• until including Chapter 3.8 (do not forget the coding challenges)
  

Agenda

• feedback
• in which chapter are you?
• discussion from last session
  • does information get lost when we convert an overlap graph to a de Bruijn graph?
  • it depends if we are working on the composition (exploded newspaper particles) or the overlap graph constructed directly from the string
  • example ATGATGGATG
  • the overlap graph constructed from the string does not equal to the overlap graph built from the composition
  • de Bruijn graph is the same for both
  • but our problem is based on exploded newspaper anyway
• https://aydos.de/jhub
• assignments ba3e, ba3f
• Midterm Eval:
  • http://tinyurl.com/yblqfbdv
  • also give feedback: do you profit from the teaching style (preparation + discussing only assignments & key points & your questions)